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20 Episodes 2001 - 2002
Episode 1
Sun, Nov 11, 200145 mins
Doggett's investigation of Kersh and the FBI isn't making him any friends, especially Brad Follmer, a new Assistant Director who has a romantic past with Reyes. Meanwhile Scully declines to tell anyone where Mulder has gone while a female super soldier is on the loose and may give Doggett the clues he needs to make his point known.

Episode 2
Sun, Nov 18, 200145 mins
While Reyes and Skinner try to convince him otherwise, Doggett practically goes rogue for his own pursuit of the Truth. His findings, and help from the female super soldier Shannon McMahon, may lead to answers critical to the status and health of William Scully. But Knowle Rohrer is back from the dead and stands in their way.

Episode 3
Sun, Dec 2, 200145 mins
A professor/inmate in a psychiatric ward may be influencing other men to kill ritualistically. Though Doggett sees it as pure manipulation, Reyes can't help but suspect none else but the devil himself possessing the professor's body.

Episode 4
Sun, Dec 9, 200145 mins
Agent Doggett has been shot and hospitalized. The only suspect is his partner. However, she was 14 miles away when the shooting occurred. The team sticks together to solve the case of being in two places at one time.

Episode 5
Sun, Dec 16, 200145 mins
Doggett and Reyes investigate a teenage boy who may have the ability to control insects and uses it to kill. Scully and a pushy, pompous, flirtatious entomologist assist them.

Episode 6
Sun, Jan 6, 200245 mins
Mulder contacts Scully which sets off a chain of events involving an NSA man obsessed with speaking and giving information to Mulder.

Episode 7
Sun, Jan 13, 200245 mins
Doggett wakes up in Mexico and can't remember his name or what he is doing there. His only clues are small flashbacks of a child (his son) and two mysterious marks on his head.

Episode 8
Sun, Jan 27, 200245 mins
Reyes finds herself inexplicably connected to a case involving ex-cons who are being skinned.

Episode 9
Sun, Mar 3, 200245 mins
A man is chased from the Canada/US border and reportedly burned alive though his body is not found. Meanwhile, in the burned remains, the FBI finds papers with the same UFO markings Scully found in Africa.

Episode 10
Sun, Mar 10, 200244 mins
Scully's baby becomes a bargaining chip for a psychotic UFO cult that feels the baby is ultimately connected to a UFO they have uncovered.
Episode 11
Sun, Mar 17, 200245 mins
Reyes is seriously injured in a car accident and finds herself in a hospital similar to purgatory with other hospital patients suffering from serious traumas. Slowly they all begin to disappear.

Episode 12
Sun, Mar 31, 200245 mins
After thirteen years in prison, a man named Fassl is released and cleared of murder charges when DNA evidence proves he had nothing to do with the murder of an entire family though he was present on the scene. Doggett, who made the arrest, refuses to accept Fassl's innocence and pursues the case again.

Episode 13
Sun, Apr 7, 200245 mins
Reyes, Doggett, and Scully are pulled into a bizarre serial murder case involving the number '3', numerology on a whole, and an eccentric man who likes to play checkers.

Episode 14
Sun, Apr 14, 200243 mins
Reyes and Doggett, with the aid of a young Mulder-worshiping FBI agent, investigate a father who is exhibiting bizarre behavior regarding his son who he has kept hidden from the outside world.

Episode 15
Sun, Apr 21, 200244 mins
The Lone Gunman go out on a limb to try to help an old friend. In the process of trying to stop a new unkown virus, the trio seal themselves in with the terrorist to stop the spread of it. Sealing their fate, and taking themselves down with the terrorist. How will they get out of this one?

Episode 16
Sun, Apr 28, 200244 mins
A disfigured man attacks Doggett trying to retrieve X-Files for Mulder...but he might be Mulder himself.

Episode 17
Sun, May 5, 200245 mins
An eerily brilliant cadet from Scully's class directs Doggett to a current murder case that may have something to do with a case that went unsolved 9 years prior - the murder of Doggett's young son.

Episode 18
Sun, May 12, 200245 mins
Reyes and Doggett investigate two murders revolving around a house that is, at some points in time, identical to the Brady Bunch house.

Episode 19
Sun, May 19, 200242 mins
Mulder's return leads to him being tried for murder before a military tribunal where he seeks to prove the very existence of an alien conspiracy and justify the maintenance of the X-Files.

Episode 20
Sun, May 19, 200242 mins
An unexpected person has come to rescue Mulder, but instead of going north to the border, Mulder goes southwest to an Anasazi ruins of New Mexico looking to find a wise man who the Native Americans call 'The Keeper of The Truth'.